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  • Software
  • NOVA APPLICATIONS
    Protein Modeling
  • Molecular Biology
  • Automated Virtual Cloning
  • Clone Sequence Verification
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  • Multiple Sequence Alignment
  • Pairwise Sequence Alignment
  • PCR Site-Directed Mutagenesis
  • PCR Primer Design
  • Sanger Sequence Assembly
  • Protein Analysis
  • Protein Docking
  • Protein Structure Prediction
  • Genomics
  • Clinical Research
  • De Novo Genome Assembly
  • Variant Analysis
  • Whole Genome/Whole Exome
  • Transcriptomics
  • ChIP-seq Data Analysis
  • RNA-Seq Alignment and Analysis
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  • COVID-19
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  • Product Notifications
  • Educational Software Request
  • Help + Tutorials
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Transcriptomics Workflows

Lasergene Genomics provides an automated pipeline for aligning and assembling RNA-Seq, ChIP-Seq, and de novo transcriptome data, getting you to comprehensive transcriptomic data analysis quicker.
Home > Workflows > Transcriptomics Workflows

Let us do the work, so you can do yours.

Transcriptome analysis is crucial to connecting the information about a genome with its functional protein expression, but it’s often a cumbersome process with vast amounts of data requiring tedious project setup and time-consuming, complicated data manipulation.

Lasergene Genomics transcriptome analysis software removes these challenges through an automated pipeline that does the setup, assembly, and annotation work for you, so that you can get straight to comprehensive transcriptome analysis, including discovering novel transcripts, identifying differentially expressed genes, and evaluating gene ontology.

Our automated pipeline includes patented algorithms to handle virtually any size data set, access to diverse genome template packages, and integration with proprietary databases, to thoroughly and accurately prepare your transcriptome data. Use Lasergene Genomics to simplify transcriptome data analysis. Let us do the work, so you can do yours.

Transcriptomics Workflows

ChIP-Seq Data Analysis

De Novo Transcriptome Assembly

RNA-Seq Alignment and Analysis

  • The best!

    “Gene expression analysis in Arraystar is the best!”

    Brenda Oppert, USDA ARS CGAHR

Popular Resources

Article

Lasergene Genomics Overview

Blog

Free NGS Assembly and Alignment for Genomic Sequencing Data

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Tips for Successful Transcriptome Sequence Assembly

Transcriptomics Workflows FAQs

Which Lasergene package do I need for transcriptome analysis?

Lasergene Genomics includes all the applications you need for our genomics and transcriptomics workflows. We also offer DNASTAR Lasergene, our complete software package which includes…

Lasergene Genomics includes all the applications you need for our genomics and transcriptomics workflows. We also offer DNASTAR Lasergene, our complete software package which includes Lasergene Molecular Biology, Lasergene Protein, and Lasergene Genomics. We offer both academic and commercial pricing for convenient annual licenses, which include upgrades and unlimited access to our technical support team.

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How do I access the transcriptome analysis workflows in Lasergene?

Our transcriptome analysis workflows can be accessed by clicking on the Transcriptomics tab in DNASTAR Navigator.

What types of read technology are supported for transcriptome analysis?

Lasergene Genomics supports Illumina, Oxford Nanopore, PacBio, 454, Sanger/ABI and Ion Torrent sequencing technologies. For a full list of supported file types, see our File Formats resource.

Can I try before I buy?

Yes! We offer free, no-obligation trials of our complete DNASTAR Lasergene package. We also understand that transcriptome data analysis can be complex and sometimes overwhelming. We get…

Yes! We offer free, no-obligation trials of our complete DNASTAR Lasergene package. We also understand that transcriptome data analysis can be complex and sometimes overwhelming. We get it! That’s why we offer free, one-on-one demonstrations, customized to your specific research objectives, and led by our scientists on staff.

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